BioConductor

AffyTiling 1.29.0

Easy extraction of individual probes in Affymetrix tiling arrays

Released Oct 17, 2008 by Charles G. Danko

Dependencies

affxparser 1.51.0 affy 1.57.0 preprocessCore 1.41.0

This package provides easy, fast functions for the extraction and annotation of individual probes from Affymetrix tiling arrays.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>AffyTiling</artifactId>
    <version>1.29.0-b23</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:AffyTiling')

Test Results

This package was last tested against Renjin 0.9.2622 on Apr 8, 2018.

• AnalyzeTilingCelFiles-examples
• AssociateWithGenes-examples
• AssociateWithInterval-examples
• TilingCelFiles2Probesets-examples
• parseBPMAP-examples

Source

Release History

• 1.29.0
• 1.28.0
• 1.26.0