BioConductor

Affyhgu133A2Expr 1.8.0

Affymetrix Human Genome U133A 2.0 Array (GPL571) Expression Data Package

Released Feb 13, 2014 by Zhicheng Ji, Hongkai Ji

This package is available for Renjin and there are no known compatibility issues.

Contains pre-built human (GPL571) databases of gene expression profiles. The gene expression data was downloaded from NCBI GEO and preprocessed and normalized consistently. The biological context of each sample was recorded and manually verified based on the sample description in GEO.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>Affyhgu133A2Expr</artifactId>
    <version>1.8.0-b3</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:Affyhgu133A2Expr')

Test Results

This package was last tested against Renjin 0.8.2359 on May 26, 2017.

Source

Release History