BioConductor

AnnotationForge 1.18.2

Code for Building Annotation Database Packages

Released Sep 1, 2017 by Marc Carlson, Herve Pages

This package can be loaded by Renjin but 3 out 9 tests failed.

Dependencies

DBI 0.7 BiocGenerics 0.22.1 S4Vectors 0.14.7 RSQLite 2.0 RCurl Biobase 2.36.2 AnnotationDbi 1.38.2 XML 3.98-1.9

Provides code for generating Annotation packages and their databases. Packages produced are intended to be used with AnnotationDbi.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>AnnotationForge</artifactId>
    <version>1.18.2-b3</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:AnnotationForge')

Test Results

This package was last tested against Renjin 0.8.2523 on Nov 12, 2017.

Source

R

Release History