BioConductor

AnnotationHubData 1.9.7

Transform public data resources into Bioconductor Data Structures

Released Feb 7, 2018 by Bioconductor Package Maintainer

This package cannot yet be used with Renjin it depends on other packages which are not available: OrganismDbi 1.21.1, rtracklayer 1.39.8, and GenomicFeatures 1.31.8

Dependencies

rtracklayer 1.39.8 GenomicFeatures 1.31.8 OrganismDbi 1.21.1 S4Vectors 0.17.29 Rsamtools 1.31.3 biocViews 1.47.1 GenomicRanges 1.31.15 AnnotationHub 2.11.2 jsonlite 1.5 RCurl futile.logger DBI 0.7 AnnotationDbi 1.41.4 Biobase 2.39.2 BiocGenerics 0.25.2 GenomeInfoDb 1.15.5 Biostrings 2.47.7 rBiopaxParser 2.19.0 IRanges 2.13.21 BiocInstaller 1.29.4 AnnotationForge 1.21.1 GEOquery 2.47.17 RSQLite XML 3.98-1.9

These recipes convert a wide variety and a growing number of public bioinformatic data sets into easily-used standard Bioconductor data structures.

Source

R

Release History