BioConductor
DMCHMM 1.2.0
Differentially Methylated CpG using Hidden Markov Model
Released Aug 22, 2017 by Farhad Shokoohi
This package cannot yet be used with Renjin it depends on other packages which are not available: rtracklayer 1.40.5
Dependencies
rtracklayer 1.40.5 GenomicRanges 1.32.6 fdrtool 1.2.15 multcomp 1.4-8 IRanges 2.14.10 BiocParallel 1.14.2 S4Vectors 0.18.3 SummarizedExperiment 1.10.1 calibrate 1.7.2
DMCHMM is a novel profiling tool for identifying differentially methylated CpG sites using Hidden Markov Model in bisulfite sequencing data.