BioConductor

DREAM4 1.16.0

Synthetic Expression Data for Gene Regulatory Network Inference from the 2009 DREAM4 challenge

Released Mar 15, 2013 by Paul Shannon

This package can be loaded by Renjin but all tests failed.

Dependencies

Simulated expression data for five 10-node, and five 100-node networks, with associated data (including solutions) from the 2009 DREAM4 challenge.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>DREAM4</artifactId>
    <version>1.16.0-b2</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:DREAM4')

Test Results

This package was last tested against Renjin 0.9.2689 on Aug 26, 2018.