BioConductor
DeSousa2013 1.16.0
Poor prognosis colon cancer is defined by a molecularly distinct subtype and precursor lesion
Released Apr 10, 2013 by Xin Wang
This package cannot yet be used with Renjin it depends on other packages which are not available: rgl 0.99.16, sva 3.28.0, hgu133plus2.db 3.2.3, and frma 1.32.0
Dependencies
frma 1.32.0 rgl 0.99.16 sva 3.28.0 hgu133plus2.db 3.2.3 cluster 2.0.7-1 ROCR 1.0-7 frmaTools 1.32.0 ConsensusClusterPlus 1.44.0 hgu133plus2frmavecs 1.5.0 AnnotationDbi 1.42.1 Biobase 2.40.0 affy 1.58.0 survival 2.42-6 siggenes 1.54.0 pamr 1.55 gplots 3.0.1
This package reproduces the main pipeline to analyze the AMC-AJCCII-90 microarray data set in De Sousa et al. accepted by Nature Medicine in 2013.