BioConductor
GSALightning 1.8.0
Fast Permutation-based Gene Set Analysis
Released Dec 30, 2015 by Billy Heung Wing Chang
This package cannot yet be used with Renjin it depends on other packages which are not available: data.table 1.11.4
An older version of this package is
more compatible with Renjin.
Dependencies
data.table 1.11.4 Matrix 1.2-14
GSALightning provides a fast implementation of permutation-based gene set analysis for two-sample problem. This package is particularly useful when testing simultaneously a large number of gene sets, or when a large number of permutations is necessary for more accurate p-values estimation.