BioConductor

GSEAlm 1.40.0

Linear Model Toolset for Gene Set Enrichment Analysis

Released Apr 30, 2018 by Assaf Oron

This package can be loaded by Renjin but all tests failed.

Dependencies

Biobase 2.40.0

Models and methods for fitting linear models to gene expression data, together with tools for computing and using various regression diagnostics.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>GSEAlm</artifactId>
    <version>1.40.0-b4</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:GSEAlm')

Test Results

This package was last tested against Renjin 0.9.2689 on Aug 26, 2018.

Source

R

Release History