BioConductor
GeneGA 1.30.0
Design gene based on both mRNA secondary structure and codon usage bias using Genetic algorithm
Released Mar 6, 2013 by Zhenpeng Li
This package cannot yet be used with Renjin it depends on other packages which are not available: seqinr 3.4-5
An older version of this package is
more compatible with Renjin.
Dependencies
R based Genetic algorithm for gene expression optimization by considering both mRNA secondary structure and codon usage bias, GeneGA includes the information of highly expressed genes of almost 200 genomes. Meanwhile, Vienna RNA Package is needed to ensure GeneGA to function properly.