BioConductor

KEGGdzPathwaysGEO 1.18.0

KEGG Disease Datasets from GEO

Released Aug 13, 2012 by Gaurav Bhatti

This package can be loaded by Renjin but 1 out 25 tests failed.

Dependencies

BiocGenerics 0.26.0 Biobase 2.40.0

This is a collection of 24 data sets for which the phenotype is a disease with a corresponding pathway in the KEGG database.This collection of datasets were used as gold standard in comparing gene set analysis methods by the PADOG package.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>KEGGdzPathwaysGEO</artifactId>
    <version>1.18.0-b1</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:KEGGdzPathwaysGEO')

Test Results

This package was last tested against Renjin 0.9.2643 on May 4, 2018.

Source

R

Release History