BioConductor

NTW 1.30.0

Predict gene network using an Ordinary Differential Equation (ODE) based method

Released Oct 8, 2011 by Yuanhua Liu

This package can be loaded by Renjin but 2 out 6 tests failed. An older version of this package is more compatible with Renjin.

Dependencies

mvtnorm 1.0-8

This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>NTW</artifactId>
    <version>1.30.0-b1</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:NTW')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.

Source

R

Release History