BioConductor

OCplus 1.54.0

Operating characteristics plus sample size and local fdr for microarray experiments

Released Apr 30, 2018 by Alexander Ploner

This package can be loaded by Renjin but 6 out 15 tests failed.

Dependencies

akima 0.6-2 multtest 2.36.0

This package allows to characterize the operating characteristics of a microarray experiment, i.e. the trade-off between false discovery rate and the power to detect truly regulated genes. The package includes tools both for planned experiments (for sample size assessment) and for already collected data (identification of differentially expressed genes).

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>OCplus</artifactId>
    <version>1.54.0-b1</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:OCplus')

Test Results

This package was last tested against Renjin 0.9.2643 on May 4, 2018.

Source

R

Release History