BioConductor

OmicsMarkeR 1.12.0

Classification and Feature Selection for 'Omics' Datasets

Released Jan 5, 2017 by Charles E. Determan Jr.

This package cannot yet be used with Renjin it depends on other packages which are not available: caret 6.0-80 and data.table 1.11.4

Dependencies

data.table 1.11.4 caret 6.0-80 assertive.base 0.0-7 e1071 1.7-0 caTools 1.17.1.1 DiscriMiner 0.1-29 foreach 1.4.4 plyr 1.8.4 assertive 0.3-5 permute 0.9-4 randomForest 4.6-14 glmnet 2.0-16 gbm 2.1.3 pamr 1.55

Tools for classification and feature selection for 'omics' level datasets. It is a tool to provide multiple multivariate classification and feature selection techniques complete with multiple stability metrics and aggregation techniques. It is primarily designed for analysis of metabolomics datasets but potentially extendable to proteomics and transcriptomics applications.

Source

R

Release History