BioConductor
TSCAN 1.18.0
TSCAN: Tools for Single-Cell ANalysis
Released Aug 15, 2015 by Zhicheng Ji
This package cannot yet be used with Renjin it depends on other packages which are not available: shiny 1.1.0
An older version of this package is
more compatible with Renjin.
Dependencies
shiny 1.1.0 fastICA 1.2-1 mclust 5.4 ggplot2 2.2.1 combinat 0.0-8 gplots 3.0.1 mgcv 1.8-23 plyr 1.8.4 igraph 1.2.1
TSCAN enables users to easily construct and tune pseudotemporal cell ordering as well as analyzing differentially expressed genes. TSCAN comes with a user-friendly GUI written in shiny. More features will come in the future.