BioConductor

affypdnn 1.53.0

Probe Dependent Nearest Neighbours (PDNN) for the affy package

Released Sep 22, 2009 by Laurent Gautier

This package can be loaded by Renjin but 4 out 8 tests failed.

Dependencies

affy 1.57.0

The package contains functions to perform the PDNN method described by Li Zhang et al.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>affypdnn</artifactId>
    <version>1.53.0-b2</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:affypdnn')

Test Results

This package was last tested against Renjin 0.9.2622 on Apr 8, 2018.

Source

R

Release History