BioConductor

ampliQueso 1.10.0

Analysis of amplicon enrichment panels

Released Aug 6, 2013 by Alicja Szabelska

This package cannot yet be used with Renjin it depends on other packages which are not available: VariantAnnotation 1.18.7, samr 2.0, DESeq 1.24.0, rnaSeqMap 2.30.0, and genefilter 1.54.2

Dependencies

genefilter 1.54.2 rnaSeqMap 2.30.0 VariantAnnotation 1.18.7 DESeq 1.24.0 samr 2.0 ggplot2 0.9.3.1 doParallel 1.0.3 knitr 1.3 xtable 1.7-1 edgeR 3.14.0 gplots 2.11.3 foreach 1.4.1 rgl 0.93.952 statmod 1.4.17

The package provides tools and reports for the analysis of amplicon sequencing panels, such as AmpliSeq

Source

R

Release History