BioConductor

arrayMvout 1.30.0

multivariate outlier detection for expression array QA

This package cannot yet be used with Renjin it depends on other packages which are not available: lumi 2.24.0, simpleaffy 2.48.0, and affyContam 1.30.0

Dependencies

simpleaffy 2.48.0 affyContam 1.30.0 lumi 2.24.0 affy 1.50.0 parody 1.30.0 mdqc 1.34.0 Biobase 2.32.0

This package supports the application of diverse quality metrics to AffyBatch instances, summarizing these metrics via PCA, and then performing parametric outlier detection on the PCs to identify aberrant arrays with a fixed Type I error rate

Source

R

Release History