BioConductor

diggitdata 1.12.0

Example data for the diggit package

Released Aug 29, 2014 by Mariano Javier Alvarez

This package is available for Renjin and there are no known compatibility issues.

Dependencies

This package provides expression profile and CNV data for glioblastoma from TCGA, and transcriptional and post-translational regulatory networks assembled with the ARACNe and MINDy algorithms, respectively.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>diggitdata</artifactId>
    <version>1.12.0-b2</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:diggitdata')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 25, 2018.