BioConductor

gQTLstats 1.12.0

gQTLstats: computationally efficient analysis for eQTL and allied studies

Released May 1, 2018 by VJ Carey

This package cannot yet be used with Renjin it depends on other packages which are not available: dplyr 0.7.6, shiny 1.1.0, gQTLBase 1.12.0, GenomicFiles 1.16.0, ffbase 0.12.3, erma 0.12.0, Homo.sapiens 1.3.1, plotly 4.8.0, HardyWeinberg 1.6.1, VariantAnnotation 1.26.1, and GenomicFeatures 1.32.2

Dependencies

gQTLBase 1.12.0 shiny 1.1.0 GenomicFiles 1.16.0 plotly 4.8.0 erma 0.12.0 dplyr 0.7.6 Homo.sapiens 1.3.1 VariantAnnotation 1.26.1 HardyWeinberg 1.6.1 ffbase 0.12.3 GenomicFeatures 1.32.2 BatchJobs 1.7 foreach 1.4.4 S4Vectors 0.18.3 SummarizedExperiment 1.10.1 ggbeeswarm 0.6.0 AnnotationDbi 1.42.1 snpStats 1.30.0 beeswarm 0.2.3 IRanges 2.14.10 GenomeInfoDb 1.16.0 BBmisc 1.11 reshape2 1.4.3 ggplot2 3.0.0 Biobase 2.40.0 GenomicRanges 1.32.6 BiocGenerics 0.26.0 limma 3.36.2 doParallel 1.0.11 mgcv 1.8-24

computationally efficient analysis of eQTL, mQTL, dsQTL, etc.

Source

R

Release History