BioConductor
genArise 1.56.0
Microarray Analysis tool
Released Apr 30, 2018 by IFC Development Team
Dependencies
xtable 1.8-2 locfit 1.5-9.1 tkrplot 0.0-23
genArise is an easy to use tool for dual color microarray data. Its GUI-Tk based environment let any non-experienced user performs a basic, but not simple, data analysis just following a wizard. In addition it provides some tools for the developer.
Installation
Maven
This package can be included as a dependency from a Java or Scala project by including
the following your project's pom.xml
file.
Read more
about embedding Renjin in JVM-based projects.
<dependencies> <dependency> <groupId>org.renjin.bioconductor</groupId> <artifactId>genArise</artifactId> <version>1.56.0-b1</version> </dependency> </dependencies> <repositories> <repository> <id>bedatadriven</id> <name>bedatadriven public repo</name> <url>https://nexus.bedatadriven.com/content/groups/public/</url> </repository> </repositories>
Renjin CLI
If you're using Renjin from the command line, you load this library by invoking:
library('org.renjin.bioconductor:genArise')
Test Results
This package was last tested against Renjin 0.9.2643 on May 4, 2018.
- Simon-examples
- WT.dataset-examples
- Zscore-examples
- Zscore.plot-examples
- a.arise-examples
- alter.unique-examples
- bg.correct-examples
- cys.plot-examples
- filter.spot-examples
- global.norm-examples
- grid.norm-examples
- i.arise-examples
- imageLimma-examples
- m.arise-examples
- ma.plot-examples
- meanUnique-examples
- r.arise-examples
- ri.plot-examples
- spotUnique-examples
- trim-examples
- write.dataSet-examples
- write.spot-examples
- write.zscore-examples