BioConductor
geneplast 1.6.2
Evolutionary and plasticity analysis of orthologous groups
This version has not yet been built and tested against Renjin. Please allow a few days for the package to be built.
Geneplast is designed for evolutionary and plasticity analysis based on orthologous groups distribution in a given species tree. It uses Shannon information theory and orthologs abundance to estimate the Evolutionary Plasticity Index. Additionally, it implements the Bridge algorithm to determine the evolutionary root of a given gene based on its orthologs distribution.