BioConductor

makecdfenv 1.56.0

CDF Environment Maker

Released Mar 6, 2006 by James W. MacDonald

This package can be loaded by Renjin but all tests failed.

Dependencies

affy 1.58.0 Biobase 2.40.0 affyio 1.50.0 zlibbioc 1.26.0

This package has two functions. One reads a Affymetrix chip description file (CDF) and creates a hash table environment containing the location/probe set membership mapping. The other creates a package that automatically loads that environment.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>makecdfenv</artifactId>
    <version>1.56.0-b3</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:makecdfenv')

Test Results

This package was last tested against Renjin 0.9.2689 on Aug 26, 2018.