BioConductor
marray 1.58.0
Exploratory analysis for two-color spotted microarray data
Released Aug 15, 2009 by Yee Hwa (Jean) Yang
This package can be loaded by Renjin but 7 out 59 tests failed.
Dependencies
Class definitions for two-color spotted microarray data. Fuctions for data input, diagnostic plots, normalization and quality checking.
Installation
Maven
This package can be included as a dependency from a Java or Scala project by including
the following your project's pom.xml
file.
Read more
about embedding Renjin in JVM-based projects.
<dependencies> <dependency> <groupId>org.renjin.bioconductor</groupId> <artifactId>marray</artifactId> <version>1.58.0-b3</version> </dependency> </dependencies> <repositories> <repository> <id>bedatadriven</id> <name>bedatadriven public repo</name> <url>https://nexus.bedatadriven.com/content/groups/public/</url> </repository> </repositories>
Renjin CLI
If you're using Renjin from the command line, you load this library by invoking:
library('org.renjin.bioconductor:marray')
Test Results
This package was last tested against Renjin 0.9.2687 on Aug 24, 2018.
- boxplot-examples
- checkTargetInfo-examples
- dim-examples
- findID-examples
- htmlPage-examples
- image-examples
- ma2D-examples
- maBoxplot-examples
- maColorBar-examples
- maCompCoord-examples
- maCompInd-examples
- maCompLayout-examples
- maCompNormA-examples
- maCompPlate-examples
- maCoord2Ind-examples
- maDefaultPar-examples
- maDotsDefaults-examples
- maDotsMatch-examples
- maGenControls-examples
- maGeneTable-examples
- maImage-examples
- maImage.func-examples
- maInd2Coord-examples
- maLegendLines-examples
- maLoess-examples
- maLoessLines-examples
- maMAD-examples
- maMed-examples
- maNorm-examples
- maNorm2D-examples
- maNormLoess-examples
- maNormMAD-examples
- maNormMain-examples
- maNormMed-examples
- maNormScale-examples
- maNum2Logic-examples
- maPalette-examples
- maPlot-examples
- maPlot.func-examples
- maSelectGnames-examples
- maText-examples
- maTop-examples
- mapGeneInfo-examples
- marrayInfo-class-examples
- marrayLayout-class-examples
- marrayNorm-class-examples
- marrayRaw-class-examples
- opVersionID-examples
- plotMA-examples
- read.Galfile-examples
- read.marrayInfo-examples
- read.marrayLayout-examples
- read.marrayRaw-examples
- rm.na-examples
- stat.confband.text-examples
- stat.gnames-examples
- write.list-examples
- write.marray-examples
- write.xls-examples