BioConductor
miRNAtap 1.14.0
miRNAtap: microRNA Targets - Aggregated Predictions
Released Oct 3, 2016 by Maciej Pajak
This package cannot yet be used with Renjin it depends on other packages which are not available: sqldf 0.4-11
An older version of this package is
more compatible with Renjin.
Dependencies
sqldf 0.4-11 AnnotationDbi 1.42.1 RSQLite stringr 1.3.1 plyr 1.8.4 DBI 1.0.0
The package facilitates implementation of workflows requiring miRNA predictions, it allows to integrate ranked miRNA target predictions from multiple sources available online and aggregate them with various methods which improves quality of predictions above any of the single sources. Currently predictions are available for Homo sapiens, Mus musculus and Rattus norvegicus (the last one through homology translation).