BioConductor

quantsmooth 1.46.0

Quantile smoothing and genomic visualization of array data

Released Oct 7, 2014 by Jan Oosting

This package can be loaded by Renjin but 1 out 12 tests failed.

Dependencies

quantreg 5.36

Implements quantile smoothing as introduced in: Quantile smoothing of array CGH data; Eilers PH, de Menezes RX; Bioinformatics. 2005 Apr 1;21(7):1146-53.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>quantsmooth</artifactId>
    <version>1.46.0-b4</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:quantsmooth')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 25, 2018.

Source

R

Release History