CRAN

AMAP.Seq 1.0

Compare Gene Expressions from 2-Treatment RNA-Seq Experiments

Released Jun 19, 2012 by Yaqing Si

An Approximated Most Average Powerful Test with Optimal FDR Control with Application to RNA-seq Data

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>AMAP.Seq</artifactId>
    <version>1.0-b235</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:AMAP.Seq')

Test Results

This package was last tested against Renjin 0.8.2427 on Sep 16, 2017.

• MGN.EM-examples
• RNASeq.Data-examples
• test.AMAP-examples

Source

View GitHub Mirror

Release History

• 1.0