CRAN

AlgebraicHaploPackage 1.2

Haplotype Two Snips Out of a Paired Group of Patients

Released Oct 31, 2015 by Jan Wolfertz

Two unordered pairs of data of two different snips positions is haplotyped by resolving a small number ob closed equations.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>AlgebraicHaploPackage</artifactId>
    <version>1.2-b31</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:AlgebraicHaploPackage')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.

• AlgebraicHaploPackage-package-examples
• callhaplotype-examples
• cubic-examples
• findoptimal-examples
• haplotypeit-examples

Source

View GitHub Mirror

Release History

• 1.2