CRAN

AmyloGram 1.1

Prediction of Amyloid Proteins

Released Oct 11, 2017 by Michal Burdukiewicz [cre, aut], Piotr Sobczyk [ctb], Stefan Roediger [ctb]

This package cannot yet be used with Renjin it depends on other packages which are not available: seqinr 3.4-5, biogram 1.4, and shiny 1.0.5

Dependencies

shiny 1.0.5 biogram 1.4 seqinr 3.4-5 ranger 0.8.0

Predicts amyloid proteins using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI.

Source

R

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