CRAN

AmyloGram 1.0

Prediction of Amyloid Proteins

Released Sep 24, 2016 by Michal Burdukiewicz [cre, aut], Piotr Sobczyk [ctb], Stefan Roediger [ctb]

This package cannot yet be used with Renjin it depends on other packages which are not available: seqinr 3.3-1 and shiny 0.14

Dependencies

seqinr 3.3-1 shiny 0.14 ranger 0.5.0 biogram 1.3

Predicts amyloid proteins using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI.

Source

R

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