CRAN

DDD 4.1

Diversity-Dependent Diversification

Released Jun 21, 2019 by Rampal S. Etienne

Dependencies

phytools 0.6-99 Matrix 1.2-17 deSolve 1.23 subplex 1.5-4 SparseM 1.77 expm 0.999-4 ape 5.3

Implements maximum likelihood and bootstrap methods based on the diversity-dependent birth-death process to test whether speciation or extinction are diversity-dependent, under various models including various types of key innovations. See Etienne et al. 2012, Proc. Roy. Soc. B 279: 1300-1309, , Etienne & Haegeman 2012, Am. Nat. 180: E75-E89, and Etienne et al. 2016. Meth. Ecol. Evol. 7: 1092-1099, . Also contains functions to simulate the diversity-dependent process.

Source

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Release History

• 4.1
• 4.0
• 3.9
• 3.8.1
• 3.7
• 3.6
• 3.5
• 3.4
• 3.3
• 3.2
• 3.1
• 3.0
• 2.6
• 2.5
• 2.4
• 2.3
• 2.2
• 2.1
• 2.0
• 1.11
• 1.10
• 1.9
• 1.8
• 1.7
• 1.5
• 1.4
• 1.3
• 1.2
• 1.1
• 0.4
• 0.3
• 0.2