CRAN

DNetFinder 1.0

Estimating Differential Networks under Semiparametric Gaussian Graphical Models

Released Jan 5, 2018 by Qingyang Zhang

This package is available for Renjin and there are no known compatibility issues.

Dependencies

flare 1.6.0

Provides a modified hierarchical test (Liu (2017) ) for detecting the structural difference between two Semiparametric Gaussian graphical models. The multiple testing procedure asymptotically controls the false discovery rate (FDR) at a user-specified level. To construct the test statistic, a truncated estimator is used to approximate the transformation functions and two R functions including lassoGGM() and lassoNPN() are provided to compute the lasso estimates of the regression coefficients.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>DNetFinder</artifactId>
    <version>1.0-b6</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:DNetFinder')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 25, 2018.

Source

R

View GitHub Mirror

Release History