CRAN

DPBBM 0.2.5

Dirichlet Process Beta-Binomial Mixture

Released Sep 29, 2016 by Lin Zhang

This package can be loaded by Renjin but 3 out 4 tests failed.

Dependencies

CEoptim 1.2 gplots 3.0.1 tmvtnorm 1.4-10 VGAM 1.0-5

Beta-binomial Mixture Model is used to infer the pattern from count data. It can be used for clustering of RNA methylation sequencing data.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>DPBBM</artifactId>
    <version>0.2.5-b18</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:DPBBM')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 2, 2018.

Source

R

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Release History