CRAN

DatABEL 0.9-6

File-Based Access to Large Matrices Stored on HDD in Binary Format

Released Mar 31, 2015 by Lennart Karssen

This package can be loaded by Renjin but 2 out 3 tests failed. An older version of this package is more compatible with Renjin.

Provides an interface to the C++ FILEVECTOR library facilitating analysis using large (giga- to tera-bytes) matrices. Matrix storage is organized in a way that either columns or rows are quickly accessible. DatABEL is primarily aimed to support genome-wide association analyses e.g. using GenABEL, MixABEL and ProbABEL.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>DatABEL</artifactId>
    <version>0.9-6-b268</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:DatABEL')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.

Source

C++

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