CRAN

Demerelate 0.9-3

Functions to Calculate Relatedness on Diploid Genetic Data

Released Mar 3, 2017 by Philipp Kraemer

This package can be loaded by Renjin but 1 out 17 tests failed.

Dependencies

fts 0.9.9 sfsmisc 1.1-2 vegan 2.5-2 mlogit 0.3-0

Functions to calculate pairwise relatedness on diploid genetic datasets. Different estimators for relatedness can be combined with information on geographical distances. Information on heterozygosity, allele- and genotype diversity as well as genetic F-statistics are provided for each population.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>Demerelate</artifactId>
    <version>0.9-3-b22</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

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Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:Demerelate')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 2, 2018.

Source

R

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Release History