CRAN
GENLIB 1.0.6
Genealogical Data Analysis
Released May 30, 2018 by Marie-Helene Roy-Gagnon
Dependencies
Matrix 1.2-14 doParallel 1.0.11 foreach 1.4.4 quadprog 1.5-5 Rcpp lattice 0.20-35 kinship2 1.6.4 bootstrap 2017.2
Genealogical data analysis including descriptive statistics (e.g., kinship and inbreeding coefficients) and gene-dropping simulations.
Installation
Maven
This package can be included as a dependency from a Java or Scala project by including
the following your project's pom.xml
file.
Read more
about embedding Renjin in JVM-based projects.
<dependencies> <dependency> <groupId>org.renjin.cran</groupId> <artifactId>GENLIB</artifactId> <version>1.0.6-b3</version> </dependency> </dependencies> <repositories> <repository> <id>bedatadriven</id> <name>bedatadriven public repo</name> <url>https://nexus.bedatadriven.com/content/groups/public/</url> </repository> </repositories>
Renjin CLI
If you're using Renjin from the command line, you load this library by invoking:
library('org.renjin.cran:GENLIB')
Test Results
This package was last tested against Renjin 0.9.2687 on Aug 25, 2018.
- GLCGMatrixGroupSingle-class-examples
- GLgen-class-examples
- GLgroupe-class-examples
- GLmultiList-class-examples
- GLmultiVector-class-examples
- gen.branching-examples
- gen.children-examples
- gen.climbPAR-examples
- gen.completeness-examples
- gen.completenessVar-examples
- gen.depth-examples
- gen.f-examples
- gen.fCI-examples
- gen.find.Min.Distance.MRCA-examples
- gen.findDistance-examples
- gen.findFounders-examples
- gen.findMRCA-examples
- gen.founder-examples
- gen.gc-examples
- gen.genealogy-examples
- gen.genout-examples
- gen.getAncestorsPAR-examples
- gen.getFoundersPAR-examples
- gen.graph-examples
- gen.half.founder-examples
- gen.implex-examples
- gen.implexVar-examples
- gen.lineages-examples
- gen.max-examples
- gen.mean-examples
- gen.meangendepth-examples
- gen.meangendepthVar-examples
- gen.min-examples
- gen.nochildren-examples
- gen.noind-examples
- gen.nomen-examples
- gen.nowomen-examples
- gen.occ-examples
- gen.parent-examples
- gen.phi-examples
- gen.phiMean-examples
- gen.phiOver-examples
- gen.pro-examples
- gen.rec-examples
- gen.sibship-examples
- gen.simuProb-examples
- gen.simuSample-examples
- gen.simuSampleFreq-examples
- gen.simuSet-examples