CRAN

GWASExactHW 1.01

Exact Hardy-Weinburg testing for Genome Wide Association Studies

Released Jan 5, 2013 by Ian Painter

This package is available for Renjin and there are no known compatibility issues.

This package contains a function to do exact Hardy-Weinburg testing (using Fisher's test) for SNP genotypes as typically obtained in a Genome Wide Association Study (GWAS).

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>GWASExactHW</artifactId>
    <version>1.01-b244</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:GWASExactHW')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 24, 2018.

Source

R
C

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Release History