CRAN

GeneticTools 0.3.1

Collection of Genetic Data Analysis Tools

Released Feb 4, 2015 by Daniel Fischer

This package is available for Renjin and there are no known compatibility issues.

Dependencies

snpStats 1.18.0 Rcpp RcppArmadillo 0.4.600.4.0 plotrix 3.5-11 gMWT 0.9

A loose collection of tools for the analysis of gene expression and genotype data, currently with main focus on eQTL and MDR analysis.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>GeneticTools</artifactId>
    <version>0.3.1-b247</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:GeneticTools')

Test Results

This package was last tested against Renjin 0.8.2500 on Oct 28, 2017.

Source

R
C
C++

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Release History