CRAN

GiNA 1.0.1

High Throughput Phenotyping

Released Apr 10, 2016 by Giovanny Covarrubias-Pazaran

Dependencies

doParallel 1.0.10 png 0.1-7 foreach 1.4.3 EBImage 4.12.2

Performs image segmentation in fruit or seeds pictures in order to measure physical features in a high-throughput manner for genome-wide association (GWAS) and genomic selection programs.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>GiNA</artifactId>
    <version>1.0.1-b21</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:GiNA')

Test Results

This package was last tested against Renjin 0.8.2500 on Oct 27, 2017.

• GINA.sample-examples
• GiNA-package-examples
• brewer.pal-examples
• color.plot-examples
• cutoff-examples
• jet.scan-examples
• pixArea-examples
• scanCRAN-examples

Source

View GitHub Mirror

Release History

• 1.0.1