CRAN

MAclinical 1.0-5

Class prediction based on microarray data and clinical parameters

Released Oct 29, 2012 by Anne-Laure Boulesteix

This package can be loaded by Renjin but all tests failed.

Dependencies

party 1.0-3 plsgenomics 1.2-6 e1071 1.6-1 st 1.1.8

'Maclinical' implements class prediction using both microarray data and clinical parameters. It addresses the question of the additional predictive value of microarray data. Class prediction is performed using a two-step method combining (pre-validated) PLS dimension reduction and random forests.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>MAclinical</artifactId>
    <version>1.0-5-b30</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:MAclinical')

Test Results

This package was last tested against Renjin 0.8.2500 on Oct 27, 2017.

Source

R

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Release History