CRAN
MCPerm 1.1.4
A Monte Carlo permutation method for multiple test correlation
Released Jun 17, 2013 by Yongshuai Jiang
This package is available for Renjin and there are no known compatibility issues.
Dependencies
A Monte Carlo permutation method for multiple test correlation.
Installation
Maven
This package can be included as a dependency from a Java or Scala project by including
the following your project's pom.xml
file.
Read more
about embedding Renjin in JVM-based projects.
<dependencies> <dependency> <groupId>org.renjin.cran</groupId> <artifactId>MCPerm</artifactId> <version>1.1.4-b37</version> </dependency> </dependencies> <repositories> <repository> <id>bedatadriven</id> <name>bedatadriven public repo</name> <url>https://nexus.bedatadriven.com/content/groups/public/</url> </repository> </repositories>
Renjin CLI
If you're using Renjin from the command line, you load this library by invoking:
library('org.renjin.cran:MCPerm')
Test Results
This package was last tested against Renjin 0.9.2644 on Jun 2, 2018.
- Armitage-examples
- Armitage.MCPerm-examples
- Armitage.TradPerm-examples
- HW.test-examples
- I2.MCPerm-examples
- I2.TradPerm-examples
- MCPerm-package-examples
- MetaGenotypeCount-examples
- MetaGenotypeData-examples
- OR-examples
- OR.MCPerm-examples
- OR.TradPerm-examples
- PermMeta.Hist-examples
- PermMeta.LnOR.CDC-examples
- PermMeta.LnOR.Hist-examples
- PermMeta.LnOR.boxplot-examples
- PermMeta.LnOR.qqnorm-examples
- PermMeta.boxplot-examples
- Q.MCPerm-examples
- Q.TradPerm-examples
- VS.Allele.CDC-examples
- VS.Allele.Hist-examples
- VS.Allele.QQ-examples
- VS.CDC-examples
- VS.Genotype.CDC-examples
- VS.Genotype.Hist-examples
- VS.Genotype.QQ-examples
- VS.Hist-examples
- VS.KS-examples
- VS.QQ-examples
- chisq.MCPerm-examples
- chisq.TradPerm-examples
- fisher.MCPerm-examples
- fisher.TradPerm-examples
- genotypeData-examples
- genotypeStat-examples
- meta-examples
- meta.MCPerm-examples
- meta.TradPerm-examples
- pearson_scatter-examples
- permuteGenotype-examples
- permuteGenotypeCount-examples