CRAN

MethylCapSig 1.0.1

Detection of Differentially Methylated Regions using MethylCap-Seq Data

Released Aug 12, 2015 by Deepak N. Ayyala

This package can be loaded by Renjin but 1 out 6 tests failed.

Dependencies

geepack 1.2-1

Provides a univariate and several high dimensional multivariate test statistics for detecting differentially methylated regions based on MethylCap-seq data.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>MethylCapSig</artifactId>
    <version>1.0.1-b37</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:MethylCapSig')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 25, 2018.

Source

R

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Release History