CRAN

NAPPA 2.0.1

Performs the Processing and Normalisation of Nanostring miRNA and mRNA Data

Released Mar 3, 2015 by Mark Wappett

This package is available for Renjin and there are no known compatibility issues.

Dependencies

plyr 1.8.1 NanoStringNorm 1.1.17

Enables the processing and normalisation of the standard mRNA data output from the Nanostring nCounter software.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>NAPPA</artifactId>
    <version>2.0.1-b29</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:NAPPA')

Test Results

This package was last tested against Renjin 0.8.2500 on Oct 27, 2017.

NAPPA-examples

Source

View GitHub Mirror