CRAN

NameNeedle 1.2.4

Using Needleman-Wunsch to Match Sample Names

Released Jul 11, 2017 by Kevin R. Coombes

This package can be loaded by Renjin but 1 out 3 tests failed.

The Needleman-Wunsch global alignment algorithm can be used to find approximate matches between sample names in different data sets. See Wang et al. (2010) .

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>NameNeedle</artifactId>
    <version>1.2.4-b12</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:NameNeedle')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.

Source

R

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Release History