CRAN

ORCME 2.0.2

Order Restricted Clustering for Microarray Experiments

Released Jul 31, 2015 by Rudradev Sengupta

This package is available for Renjin and there are no known compatibility issues.

Dependencies

Iso 0.0-17

Provides clustering of genes with similar dose response (or time course) profiles. It implements the method described by Lin et al. (2012).

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>ORCME</artifactId>
    <version>2.0.2-b37</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:ORCME')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 25, 2018.

Source

R

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Release History