CRAN

OTUtable 1.1.2

North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions

Released May 26, 2018 by Alexandra Linz

This package is available for Renjin and there are no known compatibility issues.

Analyses of OTU tables produced by 16S rRNA gene amplicon sequencing, as well as example data. It contains the data and scripts used in the paper Linz, et al. (2017) "Bacterial community composition and dynamics spanning five years in freshwater bog lakes," .

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>OTUtable</artifactId>
    <version>1.1.2-b1</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:OTUtable')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.

Source

R

View GitHub Mirror

Release History