CRAN

OneHandClapping 1.5

Prediction of condition-specific transcription factor interactions

Released Jul 27, 2012 by Sebastian Dümcke

Predictions of condition-specific TF interactions using gene activity data, such as mRNA expression measurements and a TF-target graph.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>OneHandClapping</artifactId>
    <version>1.5-b244</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:OneHandClapping')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.

• Screening-examples
• Screening.validated-examples
• biogridList.71-examples
• colorsbreaks-examples
• hclust-examples
• salt.folds-examples
• siscreen.IntScore-examples
• siscreen.lr-examples
• siscreen.paircluster-examples
• yeastract-examples

Source

View GitHub Mirror

Release History

• 1.5
• 1.0