TDAstats 0.4.0
Pipeline for Topological Data Analysis
Released Nov 5, 2018 by Raoul Wadhwa
This package cannot yet be used with Renjin it depends on other packages which are not available:
ggplot2 3.1.0
An
older version of this package is
more compatible with Renjin.
Dependencies
ggplot2 3.1.0
Rcpp
A comprehensive toolset for any useR conducting topological data analysis, specifically via the calculation of persistent homology in a Vietoris-Rips complex. The tools this package currently provides can be conveniently split into three main sections: (1) calculating persistent homology; (2) conducting statistical inference on persistent homology calculations; (3) visualizing persistent homology and statistical inference. The published form of TDAstats can be found in Wadhwa et al. (2018) . For a general background on computing persistent homology for topological data analysis, see Otter et al. (2017) . To learn more about how the permutation test is used for nonparametric statistical inference in topological data analysis, read Robinson & Turner (2017) . To learn more about how TDAstats calculates persistent homology, you can visit the GitHub repository for Ripser, the software that works behind the scenes at . This package has been published as Wadhwa et al. (2018) .
