CRAN
TE 0.3-0
Insertion/Deletion Dynamics for Transposable Elements
Released Aug 22, 2018 by Xiongtao Dai
This package cannot yet be used with Renjin it depends on other packages which are not available: rainbow 3.4
Dependencies
Provides functions to estimate the insertion and deletion rates of transposable element (TE) families. The estimation of insertion rate consists of an improved estimate of the age distribution that takes into account random mutations, and an adjustment by the deletion rate. A hypothesis test for a uniform insertion rate is also implemented. This package implements the methods proposed in Dai et al (2018).