CRAN
TSPC 1.0
Prediction using time-course gene expression
Released Oct 29, 2012 by Yuping Zhang
This package can be loaded by Renjin but 2 out 4 tests failed.
Dependencies
Performs survival and quantitative outcome using time-course gene expression, described in the following paper:Zhang Y, Tibshirani RJ, Davis RW. Predicting patient survival from longitudinal gene expression. Stat Appl Genet Mol Biol. 2010;9(1):Article41. Epub 2010 Nov 22.
Installation
Maven
This package can be included as a dependency from a Java or Scala project by including
the following your project's pom.xml file.
Read more
about embedding Renjin in JVM-based projects.
<dependencies>
<dependency>
<groupId>org.renjin.cran</groupId>
<artifactId>TSPC</artifactId>
<version>1.0-b239</version>
</dependency>
</dependencies>
<repositories>
<repository>
<id>bedatadriven</id>
<name>bedatadriven public repo</name>
<url>https://nexus.bedatadriven.com/content/groups/public/</url>
</repository>
</repositories>
Renjin CLI
If you're using Renjin from the command line, you load this library by invoking:
library('org.renjin.cran:TSPC')
Test Results
This package was last tested against Renjin 0.9.2644 on Jun 2, 2018.