CRAN

Tampo 1.0

Tools for the Analysis of Microchemical Profiles from Otoliths

Released Sep 1, 2014 by Matthias Vignon

This package can be loaded by Renjin but 17 out 24 tests failed.

Dependencies

mvpart 1.6-2

Facilitates analyzing microchemical profiles (both mono- and multielemental composition) from fish otoliths (stones from the inner ear) using a recursive partitioning approach that can accommodate some form of user-specified constraints. It also allows extracting environmental histories from otolith based on typical elemental sequences generated using methods such as LA-ICPMS. Microchemical analysis is widely used in fisheries management and fisheries biology to identify stocks and characterize fish movements but the provided functions may be considered from the more general perspective of the chronological clustering of multivariate time series using piecewise constant regressions.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>Tampo</artifactId>
    <version>1.0-b243</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:Tampo')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 2, 2018.

Source

R

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Release History